3D Complex: a Structural Classification of Protein Complexes
نویسندگان
چکیده
منابع مشابه
3D Complex: A Structural Classification of Protein Complexes
Most of the proteins in a cell assemble into complexes to carry out their function. It is therefore crucial to understand the physicochemical properties as well as the evolution of interactions between proteins. The Protein Data Bank represents an important source of information for such studies, because more than half of the structures are homo- or heteromeric protein complexes. Here we propos...
متن کاملClassification of protein-DNA complexes based on structural descriptors.
We attempt to classify protein-DNA complexes by using a set of 11 descriptors, mainly characterizing protein-DNA interactions, including the number of atomic contacts at major and minor grooves, conformational deviations from standard B- and A-DNA forms, widths of DNA grooves, GC content, specificity measures of direct and indirect readouts, and buried surface area at the complex interface. The...
متن کامل3D Classification of Urban Features Based on Integration of Structural and Spectral Information from UAV Imagery
Three-dimensional classification of urban features is one of the important tools for urban management and the basis of many analyzes in photogrammetry and remote sensing. Therefore, it is applied in many applications such as planning, urban management and disaster management. In this study, dense point clouds extracted from dense image matching is applied for classification in urban areas. Appl...
متن کاملAutomatic 3D Protein Structure Classification without Structural Alignment
In this paper, we present a new scheme named ProtClass for automatic classification of three-dimensional (3D) protein structures. It is a dedicated and unified multiclass classification scheme. Neither detailed structural alignment nor multiple binary classifications are required in this scheme. We adopt a nearest neighbor-based classification strategy. We use a filter-and-refine scheme. In the...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: PLoS Computational Biology
سال: 2005
ISSN: 1553-734X,1553-7358
DOI: 10.1371/journal.pcbi.0020155.eor